CDS
| Accession Number | TCMCG006C82162 |
| gbkey | CDS |
| Protein Id | XP_013691124.1 |
| Location | complement(join(53203..53454,53543..54046,54118..54420,54563..54769)) |
| Gene | LOC106395150 |
| GeneID | 106395150 |
| Organism | Brassica napus |
Protein
| Length | 421aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013835670.2 |
| Definition | exopolygalacturonase clone GBGE184-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | pga4 pga4 (polygalacturonase 4) |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R07413 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01213
[VIEW IN KEGG] |
| EC |
3.2.1.67
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0003824 [VIEW IN EMBL-EBI] GO:0004553 [VIEW IN EMBL-EBI] GO:0004650 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005576 [VIEW IN EMBL-EBI] GO:0005618 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0016787 [VIEW IN EMBL-EBI] GO:0016798 [VIEW IN EMBL-EBI] GO:0030312 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTAGCGCGAGAAGTTTGGTTGCCAAGGCAAATAATACTAATGTAGGCTCATTAATCTTAATGACCGTGGTGTTAGGTTCTTGTATAGCTAATGGTGAATATCTCGGTGCCCGCCGTGGCCTTGCCGCTGTTGCCGGAAACCCTACGGTCTTTGATATTACTAAGAATGGAGCAGTGGGAAATGGTGCCACCGATTCTTCCAAGGCGTTTCTAAACACATGGCTCCAAGTGTGTGCCAGTCCTGTACCAGCAACGCTACTAGTCCCTAAAGGAGATTTCTTGGCTGGTCCAGTAATTTTTGCTGGTCCATGCAAGAGCAAAGTGACCGTCGAAGTTCAGGGCACAATCATCGCTCCACCAAGCGGATACCCGACTCCTGAATGGTTCTTATTCGAACATGTCGATAATGTCGTCCTCACCGGACCCGGCACATTCCACGGCAAAGGTGAAGCCGTTTGGAAAGCAGATGGCTGTGGTAAAAAGGTGGACTGCAATCTTCCTCCAACGTCTCTAAAATTCAGAAACATCTTAAACCTTGACATTTCCGGCATTAGCTCGGTCAACGCAAAGGCCTTCCACATGTTCTTGGTAAAAACTACAAATGTCAACGTCCAAAACATCAAGATTACTGCCCCTGCTGAAAGTCCCAACACCGATGGTATCCATTTGAGCAATGCGGTCAACGTTCACATCGTTGACAGTTTAATAGCTACAGGAGACGATTGTATCTCAGTCGGTCGTGGTTCCACCAATGTAACCGTCGAGCGCGTGACTTGTGGCCCAGGACACGGCCTAAGTGTCGGTAGTCTTGGTAAGTACCCGAACGAGGAGAATGTTGCCGGCATTCACTTTAAGAAGTGCACCATGAAAGATACTGACAATGGTCTTAGAATCAAGAGTTGGGGTGGTTCGTCTCCAAGCACGGCTGTGGACATCACGTTTGAAGATATTATGATGACAAACGTCAAGAACCCAATCATCATTGACCAAAATTACGGCTCAAGAGGCGGAGATTCAAAAGTTGCGATAAGCAATGTGCTGTTCAAGAACGTAAGAGGAACAACAATTACAAAAGACGAAGTTCAGATCATGTGCAGCAAATCAGTACCGTGCAAAGGAGTCAGCGTCGTTGACGTGGAATTGAACTTTGTAGGTGACAAAGGAGGACATCCCTCGGCGTCAGGAGGTTTGGTCGGAGCTCTTTGTGACAACGCCAATGTTATCTTCGGTGGAAAACTTAGCTTCCCTATGTGTCCCAAATAA |
| Protein: MASARSLVAKANNTNVGSLILMTVVLGSCIANGEYLGARRGLAAVAGNPTVFDITKNGAVGNGATDSSKAFLNTWLQVCASPVPATLLVPKGDFLAGPVIFAGPCKSKVTVEVQGTIIAPPSGYPTPEWFLFEHVDNVVLTGPGTFHGKGEAVWKADGCGKKVDCNLPPTSLKFRNILNLDISGISSVNAKAFHMFLVKTTNVNVQNIKITAPAESPNTDGIHLSNAVNVHIVDSLIATGDDCISVGRGSTNVTVERVTCGPGHGLSVGSLGKYPNEENVAGIHFKKCTMKDTDNGLRIKSWGGSSPSTAVDITFEDIMMTNVKNPIIIDQNYGSRGGDSKVAISNVLFKNVRGTTITKDEVQIMCSKSVPCKGVSVVDVELNFVGDKGGHPSASGGLVGALCDNANVIFGGKLSFPMCPK |